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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11101226 chr10:50960989 G/C FAM21B chr10:47894023-47949412:+ 0.53 6.01 4.32E-9 Box Plot
BLCA rs11104161 chr12:87259923 A/C CCDC59 chr12:82617460-82752584:- -0.66 -6.05 3.39E-9 Box Plot
BLCA rs11107304 chr12:94365471 C/G SMOC1 chr14:70320848-70499083:+ -0.42 -6.02 4.2E-9 Box Plot
BLCA rs11107316 chr12:94380526 C/G SMOC1 chr14:70320848-70499083:+ -0.42 -6.14 2.04E-9 Box Plot
BLCA rs11118422 chr1:219968605 A/G RAB4A chr1:229406809-229441641:+ 0.94 6.6 1.34E-10 Box Plot
BLCA rs11119816 chr1:211999488 A/G CCT2 chr12:69979114-69995350:+ 0.56 7.83 4.95E-14 Box Plot
BLCA rs11119816 chr1:211999488 A/G CPSF6 chr12:69633317-69668138:+ 0.48 7.33 1.41E-12 Box Plot
BLCA rs11119816 chr1:211999488 A/G FRS2 chr12:69864129-69973569:+ 0.5 6.76 5.23E-11 Box Plot
BLCA rs11119816 chr1:211999488 A/G MDM2 chr12:69201956-69244466:+ 0.53 6.16 1.83E-9 Box Plot
BLCA rs11119816 chr1:211999488 A/G NUP107 chr12:69080514-69139589:+ 0.49 6.56 1.72E-10 Box Plot
BLCA rs11121047 chr1:7952638 G/A AQP1 chr7:30951309-30965131:+ -0.24 -6.37 5.31E-10 Box Plot
BLCA rs11123832 chr2:101069807 A/G LOC285359 chr3:101431278-101432259:+ 0.39 7.34 1.3E-12 Box Plot
BLCA rs11129995 chr3:43216773 A/C ATRIP chr3:48488114-48507115:+ 0.73 6.34 6.44E-10 Box Plot
BLCA rs11129995 chr3:43216773 A/C CTNNB1 chr3:41236328-41301587:+ 0.65 6.07 3.03E-9 Box Plot
BLCA rs11129995 chr3:43216773 A/C DCP1A chr3:53317448-53381637:- 0.74 6.19 1.59E-9 Box Plot